(16s) No 2. Data Preparation (16S rRNA) Output

Version 2 2020-08-14, 19:31

Version 1 2020-08-12, 12:30

dataset

posted on 2020-08-14, 19:31 authored by Jarrod ScottJarrod Scott

Output files from the No 2. Data Preparation Workflow page of the Bocas Hypoxia study.

File names and descriptions:

*seq_table.txt, *_tax_table.txt, *_asv.fasta: Sequence tables, taxonomy tables, and ASV fasta files from the full phyloseq object (before removing contaminants) and the trimmed dataset (after removing contaminants).

16s-data_prep.rdata: contains all variables and phyloseq objects from the data prep pipeline. To see the Objects, in R run load("16s-data_prep.rdata", verbose=TRUE)