(16s) No 3. Diversity (16s rRNA) Output
datasetposted on 15.08.2020 by Jarrod Scott
Datasets usually provide raw data for analysis. This raw data often comes in spreadsheet form, but can be any collection of data, on which analysis can be performed.
Output files from the No 3. Diversity Workflow page of the Bocas Hypoxia study.
File names and descriptions:
16s-water.rdata: contains all variables and phyloseq objects from the pipeline. To see the Objects, in R run load("16s-water.rdata", verbose=TRUE)
ps_water.rds: Phyloseq object where NA ranks renamed by next named rank.
ps_water_o.rds: Phyloseq object with original NA ranks.
ps_water_ox.rds: Same Phyloseq object as ps_water_o.rds but with sample oxygen states added.