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(high-temp) No 6. Beta diversity (16S rRNA/ITS) Output

dataset
posted on 07.05.2022, 12:35 by Jarrod ScottJarrod Scott
Output files from the No 6. Beta diversity Workflow page of the SWELTR high-temp study. In this workflow, we tested multiple distance metrics to assess beta diversity between temperature treatments. The workflow is split into two parts.

beta_wf_part_1.rdata: Part 1 contains all variables and objects (for 16s rRNA and ITS) from beta dispersion calculations and significant tests. To see the Objects, in R run load("beta_wf_part_1.rdata", verbose=TRUE)

beta_wf_part_2.rdata: Part 2 contains all variables and objects (for 16s rRNA and ITS) from calculating distances as well as plots for ordination, within-group variation, and between-group variation. To see the Objects, in R run load("beta_wf_part_2.rdata", verbose=TRUE)

Source code for the workflow can be found here:
https://github.com/sweltr/high-temp/blob/master/beta.Rmd


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