Dataset: Modeling organic carbon accumulation rates and residence times in coastal vegetated ecosystems

2019

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Data table(s) 3

Other entity(ies) 0

Abstract

Coastal vegetated 'blue carbon' ecosystems can store large quantities of organic carbon (OC) within their soils; however, the importance of these sinks for climate change mitigation depends on the OC accumulation rate (CAR) and residence time. Here we evaluate how two modeling approaches, a Bayesian age-depth model alone or in combination with a two-pool OC model, aid in our understanding of the timelines of OC within seagrass soils. Fitting these models to data from Posidonia oceanica soil cores, we show that age-depth models provided reasonable CAR estimates but resulted in a 22% higher estimation of OC burial rates when ephemeral rhizosphere OC was not subtracted. This illustrates the need to standardize CAR estimation to match the research target and time frames under consideration. Using a two-pool model in tandem with an age-depth model also yielded reasonable, albeit lower, CAR estimates with lower estimate uncertainty, which increased our ability to detect among-site differences and seascape-level trends. Moreover, the two-pool model provided several other useful soil OC diagnostics, including OC inputs, decay rates, and transit times. At our sites, soil OC decayed quite slowly both within fast-cycling (0.028 +/- 0.014 yr^{-1}) and slow-cycling (0.0007 +/- 0.0003 yr^{-1}) soil pools, resulting in OC taking between 146 and 825 yrs to transit the soil system. Further, an estimated 85 % to 93 % of OC inputs enter slow-cycling soil pools, with transit times ranging from 891 to 3115 yrs, substantiating the importance of P. oceanica soils as natural, long-term OC sinks.

Metadata Provider

 

Creators

  • E. Fay  Belshe  fbelshe@gmail.com

Associated parties

  • E. Fay  Belshe 
  • Jose  Sanjuan 
  • Carmen  Leiva-Dueñas 
  • Nerea  Piñeiro-Juncal 
  • Oscar  Serrano 
  • Paul S.  Lavery 
  • Miguel Angel  Mateo 

Keywords

Temporal coverage

Start date End date
2015-04-15 2019-06-01

Geographic coverage

Taxonomic coverage

Rank name Value

Data tables


belshe_et_al_2019_methods_data , Methods information for study


Physical: belshe_et_al_2019_material_and_methods.csv
attribute name definition format, unit or codes
study_id Unique identifier for the study made up of the first author's family name, as well as the second author's or 'et al.' if more than three, then publication year spearated by underscores. See worksCited.bib for more detail.
coring_method Code indicating what type of device was used to collect soil depth profiles. pvc and hammer = PVC pipe was driven into the sediment with a hammer to recover a core 
roots_flag Code indicating whether live roots were included or excluded from carbon assessments. roots and rhizomes included = Roots and rhizomes were included in dry bulk density and or organic matter and carbon measurements 
sediment_sieved_flag Code indicating whether or not sediment was sieved prior to carbon measurements. sediment not sieved = Sediment was not sieved prior to analysis for organics. 
compaction_flag Code indicating how the authors qualified or quantified compaction of the core. compaction quantified = Compaction was quantified and corrected for in core based measurements 
dry_bulk_density_temperature Temperature at which samples were dried to measure dry bulk density. This can include either samples that were freeze dried or oven dried. celsius
dry_bulk_density_time Time over which samples were dried to measure dry bulk density. hour
dry_bulk_density_sample_volume Sample volume used for bulk density measurements, if held constant. cubicCentimeter
dry_bulk_density_flag Any notable codes regarding how the authors quantified dry bulk density. to constant mass = Bulk density methodology did not specify drying temperature or length, only that samples were dried to a constant mass 
carbonates_removed Whether or not carbonates were removed prior to calculating fraction organic carbon. TRUE = Carbonates were removed before measuring organic carbon. 
carbonate_removal_method The method used to remove carbonates prior to measuring fraction carbon. direct acid treatment = Carbonates were removed using direct application of dilute acid 
fraction_carbon_method Code indicating the method for which fraction carbon was measured or modeled (Note: regression based models are permitted, but the use of the Bemmelen factor [0.58 gOC gOM-1] is discouraged). EA = Each sample presented was measured using Elemental Analysis 
fraction_carbon_type Code indicating whether fraction_carbon refers to organic or total carbon. organic carbon = Author specified that fraction carbon measurements were of organic carbon 
pb210_counting_method Code indicating the method used for determining lead 210 activity. alpha = Alpha counting method used 
excess_pb210_rate Code indicating the mass or accretion rate used in the excess_pb_210_model mass accumulation = Excess 210Pb modeled using mass accumulation rate 
excess_pb210_model Code indicating the model used to estimate excess lead 210. CRS = Constant rate of supply model used 
c14_counting_method Code indicating the method used for determining radiocarbon activity. AMS = Accelerator mass spectroscopy used 
dating_notes Any submitter defined notes elaborating on the process of dating the core not yet made clear by the coding.
age_depth_model_reference Code indicating the reference or 0 year of the age depth model. YBP = Year zero is defined as years before present, 1960 CE 

belshe_2019_core_data , Soil core information


Physical: belshe_2019_core.csv
attribute name definition format, unit or codes
study_id Unique identifier for the study made up of the first author's family name, as well as the second author's or 'et al.' if more than three, then publication year spearated by underscores. See worksCited.bib for more detail.
site_id Site identification code unique to each study.
core_id Core identification code unique to each site.
core_date Date of core collection. YYYY-MM-DD
core_notes Any other relevant submitter generated notes on how cores were collected.
core_latitude Positional latitude of the core in decimal degree WGS84. degree
core_longitude Positional longitude of the core in decimal degree WGS84. degree
core_position_accuracy Accuracy of latitude and longitude measurement, if determined and recorded. meter
core_position_method Code indicating how latitude and longitude were determined. handheld = Conventional Commercially available hand-held GPS 
core_elevation_notes Any relevant submitter generated notes on how elevation was determined
salinity_class Code based on submitter field observation or measurement indicating average annual salinity (Note: Palustrine and freshwater should only include tidal wetlands, or wetlands that are potentially/formerly tidal but artificially freshened due to artificial tidal restrictions). saline = 30-50 ppt 
salinity_method Indicate whether salinity_class was determined using a field observation or a measurement field observation = Salinity inferred by field observation such as vegetation 
vegetation_class Code based on submitter field observations or measurement indicating dominant wetland vegetation type. seagrass = Describes tidal or subtidal communities dominated by rooted vascular plants. 
vegetation_method Indicate whether vegetation_class was determined using a field observation or a measurement field observation = Vegetation inferred by field observation 
vegetation_notes Any relevant submitter generated notes on how vegetation_class and dominant_species were determined.
inundation_class Code based on submitter field observation or measurement indicating how often the coring location is inundated. submerged = Core location is continuously submerged 
inundation_notes Any relevant submitter generated notes on how inundation was determined
core_length_flag Indicated whether or not the coring team believes they recovered a full sediment profile, down to bedrock, or other non-marsh interface. core depth limited by length of corer = The total depth of the core was limited by the length of the coring device core depth represents deposit depth = Authors report that the depth of the core represents the depth of the wetland soil deposit 

belshe_2019_depthseries_data , Soil core depthseries information


Physical: belshe_2019_depthseries.csv
attribute name definition format, unit or codes
study_id Unique identifier for the study made up of the first author's family name, as well as the second author's or 'et al.' if more than three, then publication year spearated by underscores. See worksCited.bib for more detail.
site_id Site identification code unique to each study.
core_id Core identification code unique to each site.
depth_min Minimum depth of a sampling increment. centimeter
depth_max Maximum depth of a sampling increment. centimeter
depth_max_decompressed Estimated decompression of core interval using an exponential model centimeter
dry_bulk_density Dry mass per unit volume of a soil sample. This does not include ash free bulk density. gramsPerCubicCentimeter
fraction_carbon_measured Measured mass of carbon relative to sample dry mass. dimensionless
fraction_carbon_modeled Modeled mass of carbon relative to sample dry mass. dimensionless
fraction_carbon_density_measured Measured mass of carbon per unit volume of a soil sample gramsPerCubicCentimeter
fraction_carbon_density_modeled Modeled mass of carbon per unit volume of a soil sample gramsPerCubicCentimeter
pb210_age Most likely, median, or mean age of the depth interval from submitter generated age depth model using Pb210 radioactivity counts. nominalYear
pb210_age_sd Standard deviation of age estimate from submitter generated age depth model using Pb210 radioactivity counts. nominalYear
c14_age Radiocarbon age as estimated from AMS measurements. radiocarbonYear
c14_age_sd Estimated uncertainty in c14_age. radiocarbonYear
c14_material Description of the material selected for radiocarbon (14C) dating.
depth_interval_notes Any other submitter generated notes specific to the depth interval.

Custom units

unit name parent SI unit unit type description
cubicCentimeter cubicMeter volume cubic centimeter
radiocarbonYear time radiocarbon years

Other entities

Intellectual Rights

This dataset is listed under a Creative Commons BY 4.0 and can be used with attribution. https://creativecommons.org/licenses/by/4.0/