Dendrometer band meta data
The file NSF_Dendro_time_series.Rdata contains a single R object, Time.series. This object is of class list and contains 1755 elements. Each element is a dataframe of a single annual time series of bole growth for an individual tree.
The dataframe has 18 variables and as many rows as there were dendrometer band gap measurements for that tree in that year.
> head(Time.series[[1]], 2)
SITE YEAR TREE_ID BAND_NUM SP UNIQUE_ID DATA_SET ORG_DBH GAP_WIDTH DBH
5227 HF 2018 80271 1 FAGR 80271-1 NSF 18.6 7.25 20.69836
5228 HF 2018 80271 1 FAGR 80271-1 NSF 18.6 7.69 20.71236
DOY SKIP ADJUST REMOVE NEW_BAND DBH_TRUE resids.vec std.resids
5227 86 0 0 0 0 18.69840 -0.007794043 -1.986681
5228 99 0 0 0 0 18.71241 0.005331710 1.325242
Variable | Explanation |
---|---|
SITE | Location of the tree; HF or SERC |
YEAR | Year of the time series |
TREE_ID | Tag number used to identify the tree |
BAND_NUM | Identifier of the dendrometer band; 1 = first band installed, 2 = second band installed, etc. |
UNIQUE_ID | Combination of the SITE, TREE_ID, and BAND_NUM |
DATA_SET | Project the data was collected for originally |
ORG_DBH | The first diameter (at breast height [DBH]) of the tree in cm |
GAP_WIDTH | The measurement of the dendrometer band in mm |
DBH | Calculated DBH from GAP_WIDTH AND ORG_DBH |
DOY | day of year the measurement was recorded |
SKIP | Flag to skip band |
ADJUST | Flag that band has been adjusted (a sustained change in gap size) |
REMOVE | Outlier or erroneous measurement (remove one observation) |
NEW_BAND | 1 or 0; 1 for a newly installed band |
DBH_TRUE | Calculated DBH from origin, gap width, and correction for chord vs. arc |
resids.vec | Vector of residuals around fitted function |
std.resids | Standardized residuals (for comparisons across different growth amounts) |